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| also: | Border Western Athletic |
| Year | Seed | Record | Finishing Round | Coach |
| 1951 | - | 0 - 1 | Sweet Sixteen (1st rd) | Fred Enke |
| 1976 | - | 2 - 1 | Elite Eight (3rd rd) | Fred Snowden |
| 1977 | - | 0 - 1 | Round of 32 (1st rd) | Fred Snowden |
| 1985 | 10 | 0 - 1 | Round of 64 (1st rd) | Luther Olson |
| 1986 | 9 | 0 - 1 | Round of 64 (1st rd) | Luther Olson |
| 1987 | 10 | 0 - 1 | Round of 64 (1st rd) | Luther Olson |
| 1988 | 1 | 4 - 1 | National Semifinals (5th rd) | Luther Olson |
| 1989 | 1 | 2 - 1 | Sweet Sixteen (3rd rd) | Luther Olson |
| 1990 | 2 | 1 - 1 | Round of 32 (2nd rd) | Luther Olson |
| 1991 | 2 | 2 - 1 | Sweet Sixteen (3rd rd) | Luther Olson |
| 1992 | 3 | 0 - 1 | Round of 64 (1st rd) | Luther Olson |
| 1993 | 2 | 0 - 1 | Round of 64 (1st rd) | Luther Olson |
| 1994 | 2 | 4 - 1 | National Semifinals (5th rd) | Luther Olson |
| 1995 | 5 | 0 - 1 | Round of 64 (1st rd) | Luther Olson |
| 1996 | 3 | 2 - 1 | Sweet Sixteen (3rd rd) | Luther Olson |
| 1997 | 4 | 6 - 0 | National Championship (6th rd) | Luther Olson |
| 1998 | 1 | 3 - 1 | Elite Eight (4th rd) | Luther Olson |
| 1999 | 4 | 0 - 1 | Round of 64 (1st rd) | Luther Olson |
| 2000 | 1 | 1 - 1 | Round of 32 (2nd rd) | Luther Olson |
| 2001 | 2 | 5 - 1 | National Championship (6th rd) | Luther Olson |
| 2002 | 3 | 2 - 1 | Sweet Sixteen (3rd rd) | Luther Olson |
| 2003 | 1 | 3 - 1 | Elite Eight (4th rd) | Luther Olson |
| 2004 | 9 | 0 - 1 | Round of 64 (1st rd) | Luther Olson |
| 2005 | 3 | 3 - 1 | Elite Eight (4th rd) | Luther Olson |
| 2006 | 8 | 1 - 1 | Round of 32 (2nd rd) | Luther Olson |
| 2007 | 8 | 0 - 1 | Round of 64 (1st rd) | Luther Olson |
| 2008 | 10 | 0 - 1 | Round of 64 (1st rd) | Kevin O'Neill |
| 2009 | 12 | 2 - 1 | Sweet Sixteen (3rd rd) | Russ Pennell |
